Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017486.1 Corchorus olitorius cultivar O-4 contig17519, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4323

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1103--1371
4
68.8
4
67
15
118
26
7
0
64
1.26
1104--1230
19
6.1
19
70
17
58
28
7
0
62
1.28
1059--1314
46
5.8
46
84
9
327
26
8
1
63
1.30
1227--1324
39
2.5
40
80
12
105
26
4
1
68
1.14
1038--1314
88
3.1
89
88
5
400
27
8
1
62
1.31

Tables:   1

The End!