Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017761.1 Corchorus olitorius cultivar O-4 contig17794, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20570

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--1856
667
2.8
658
86
4
2505
32
15
14
37
1.88
11--1857
334
5.6
331
84
4
2297
32
15
15
37
1.88
6268--6322
29
1.9
28
88
3
83
23
21
9
45
1.80
6246--6330
29
2.9
29
77
10
82
22
24
10
42
1.85
6432--6510
29
2.6
30
80
11
90
41
13
24
20
1.88
16745--16799
25
2.2
25
87
3
76
16
25
9
49
1.75
16752--16799
25
1.9
25
91
0
78
16
20
8
54
1.68

Tables:   1

The End!