Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017782.1 Corchorus olitorius cultivar O-4 contig17815, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12578

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1079--1114
19
1.9
18
88
5
54
30
22
8
38
1.83
6881--7207
110
3.0
110
87
5
489
46
6
16
30
1.73
6881--7207
54
5.9
55
89
3
496
46
6
16
30
1.73
7166--7253
46
1.9
46
88
0
131
46
7
13
31
1.72
7343--7452
53
2.1
53
83
8
138
49
7
18
25
1.73

Tables:   1

The End!