Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017845.1 Corchorus olitorius cultivar O-4 contig17878, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20474

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15--2890
333
8.7
331
80
7
2788
36
15
14
33
1.88
3543--3572
15
1.9
16
93
6
53
53
3
0
43
1.17
13269--16291
337
9.1
329
78
7
2591
37
15
13
33
1.87
16793--20474
855
4.3
854
89
3
5459
33
13
17
35
1.89
19623--19995
199
1.9
200
86
3
536
38
9
16
36
1.81

Tables:   1

The End!