Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017866.1 Corchorus olitorius cultivar O-4 contig17899, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26373

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1748--1775
14
2.0
14
100
0
56
28
7
14
50
1.69
2084--6445
666
6.6
642
79
9
3118
33
16
16
33
1.91
2084--6489
330
13.3
331
79
8
3588
33
16
16
33
1.91
4918--4987
35
2.0
35
100
0
140
25
11
25
37
1.90
4921--4995
35
2.1
35
95
0
132
26
12
24
37
1.90
4956--6489
335
4.6
330
81
9
1462
34
15
16
32
1.91
10617--11415
305
2.6
302
83
5
979
32
14
16
37
1.88
11530--11561
2
16.0
2
100
0
64
50
0
0
50
1.00
13499--13641
69
2.1
69
91
0
232
25
24
20
30
1.99

Tables:   1

The End!