Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017890.1 Corchorus olitorius cultivar O-4 contig17923, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28826

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3252--3782
222
2.4
222
94
0
929
35
11
17
36
1.85
3845--3938
45
2.2
43
84
7
120
40
20
5
34
1.75
4911--4983
3
24.3
3
100
0
146
67
0
0
32
0.91
5609--6866
332
3.8
330
79
7
1180
34
14
14
36
1.87
8071--8129
30
2.1
27
84
12
75
38
0
11
49
1.40
8745--8803
30
2.1
27
84
12
75
38
0
11
49
1.40
11477--11509
2
16.5
2
100
0
66
48
0
0
51
1.00
11509--11556
2
24.0
2
100
0
96
0
0
50
50
1.00
11955--12065
22
5.0
21
77
6
96
44
11
16
27
1.82
11953--12065
44
2.6
44
86
0
145
44
12
15
27
1.83
12469--12529
26
2.5
24
82
10
72
44
6
18
31
1.75
12553--12808
22
11.4
22
73
8
151
34
10
19
35
1.86
12646--12862
44
4.9
44
73
5
143
33
11
17
37
1.86
13756--13853
48
2.0
48
92
0
160
33
11
5
50
1.60
15465--15522
29
2.0
29
82
3
71
37
18
5
37
1.74

Tables:   1

The End!