Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017969.1 Corchorus olitorius cultivar O-4 contig18002, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41306

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2453--2510
19
2.9
19
78
9
71
39
13
17
29
1.88
3647--8945
331
16.0
330
77
7
4767
35
17
14
33
1.90
3647--8948
663
8.0
658
79
8
5121
35
17
14
33
1.90
10197--10227
13
2.4
13
100
0
62
0
16
0
83
0.64
15546--15578
3
11.0
3
100
0
66
66
0
0
33
0.92
16633--16677
22
2.0
22
100
0
90
15
13
31
40
1.86
17008--17351
175
2.0
175
89
2
530
38
11
11
39
1.77
30713--30747
15
2.3
15
95
0
61
57
22
5
14
1.59
36319--36360
20
2.1
20
100
0
84
19
30
9
40
1.83
39441--39499
29
2.0
29
100
0
118
38
6
23
30
1.81

Tables:   1

The End!