Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017979.1 Corchorus olitorius cultivar O-4 contig18012, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53359

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3438--3464
13
2.1
13
100
0
54
37
0
48
14
1.45
16349--16386
20
1.9
20
94
0
67
63
15
15
5
1.48
16379--16406
3
9.3
3
100
0
56
67
0
32
0
0.91
18131--18487
177
2.0
178
84
3
459
20
27
15
37
1.92
27221--27282
31
2.0
31
100
0
124
22
22
6
48
1.73
28394--28420
6
4.5
6
100
0
54
0
33
14
51
1.43
29836--29860
6
4.2
6
100
0
50
0
20
32
48
1.50
47666--47698
17
1.9
17
100
0
66
24
6
48
21
1.72
48665--48726
21
3.0
21
87
0
88
33
22
20
22
1.97
48949--53359
333
13.3
333
88
2
6193
35
16
15
31
1.91

Tables:   1

The End!