Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018169.1 Corchorus olitorius cultivar O-4 contig18202, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64100

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--3714
333
11.4
333
81
7
4047
34
16
14
35
1.89
1--3668
986
3.8
975
81
8
4026
34
16
14
34
1.89
3231--4164
490
1.9
480
84
6
1162
34
16
14
35
1.88
3717--4736
332
3.0
328
83
6
1257
33
15
16
34
1.90
4751--8277
330
10.8
330
80
6
3620
33
16
15
34
1.90
4751--8277
652
5.4
648
82
6
3701
33
16
15
34
1.90
8590--8771
90
2.0
91
83
6
233
32
15
20
30
1.94
8786--9763
329
3.0
314
78
10
906
35
16
14
34
1.89
9754--10450
322
2.1
325
84
5
888
33
15
16
35
1.90
40976--41009
9
3.8
9
88
0
50
41
55
0
2
1.15
42729--42781
24
2.2
24
90
6
81
41
11
13
33
1.80
61116--61142
3
9.0
3
100
0
54
66
0
0
33
0.92
62381--63868
336
4.4
334
90
2
2401
34
16
16
32
1.91
62381--63868
670
2.2
669
96
0
2708
34
16
16
32
1.91

Tables:   1

The End!