Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018180.1 Corchorus olitorius cultivar O-4 contig18213, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44474

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10917--10981
31
2.1
31
100
0
130
44
18
12
24
1.84
28333--28370
18
2.0
20
90
10
62
47
18
28
5
1.70
38501--38539
18
2.2
18
90
0
60
35
2
23
38
1.68
38842--39264
108
3.9
106
89
3
604
47
21
22
8
1.77
40432--42507
333
6.2
331
85
4
2651
32
13
17
35
1.89
40432--42507
665
3.1
660
85
4
2787
32
13
17
35
1.89
42289--42754
246
1.9
247
86
4
674
35
10
15
38
1.83
41956--43089
581
2.0
580
88
2
1715
33
12
17
36
1.87
42534--44474
335
5.8
335
87
4
2728
32
14
17
35
1.90

Tables:   1

The End!