Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018181.1 Corchorus olitorius cultivar O-4 contig18214, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6182

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--4177
332
12.6
336
87
3
5545
32
14
18
35
1.90
1--4177
668
6.3
668
88
2
5554
32
14
18
35
1.90
4035--4325
148
2.0
148
88
2
442
28
12
20
38
1.88
3705--4660
483
2.0
478
88
2
1441
31
13
19
35
1.91
4182--6178
335
6.0
336
87
2
2754
32
14
17
35
1.90
3392--4998
813
2.0
806
90
2
2457
31
13
18
35
1.90
4182--6179
669
3.0
665
86
3
2787
32
14
17
35
1.90

Tables:   1

The End!