Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018182.1 Corchorus olitorius cultivar O-4 contig18215, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59235

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
407--649
119
2.0
119
88
3
355
40
7
16
34
1.78
518--3570
335
9.2
333
86
3
4078
32
14
17
35
1.90
3121--4098
532
1.8
526
86
4
1396
33
15
16
34
1.91
3586--4574
331
3.0
331
96
1
1797
33
15
17
33
1.91
2724--4429
859
2.0
858
86
4
2357
32
15
17
34
1.91
7524--7552
6
4.8
6
100
0
58
51
0
34
13
1.42
7587--7751
54
3.0
54
84
6
190
40
15
23
20
1.91
7587--7750
57
2.9
57
84
6
185
40
15
22
20
1.90
33358--33416
21
3.0
19
78
9
73
35
10
22
32
1.87
57696--57757
29
2.2
29
97
2
117
50
11
22
16
1.76
57783--58533
380
2.0
380
95
0
1369
42
13
15
28
1.85

Tables:   1

The End!