Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018185.1 Corchorus olitorius cultivar O-4 contig18218, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51512

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9429--21315
319
36.6
323
69
15
3774
31
15
17
35
1.91
11567--12113
286
1.9
285
86
4
769
33
14
17
35
1.89
10607--15684
635
8.0
608
76
11
3070
31
15
17
35
1.91
13997--14060
32
2.0
32
90
6
103
34
6
21
37
1.79
15555--15870
170
1.8
172
83
6
419
33
12
15
37
1.85
15702--21295
946
5.8
937
79
10
4214
31
15
17
35
1.91
17777--21315
642
5.5
640
83
7
3419
30
15
17
35
1.92
29937--30059
60
2.0
60
87
0
174
31
16
21
30
1.95
51021--51120
27
3.7
27
83
10
98
48
2
34
16
1.57

Tables:   1

The End!