Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018359.1 Corchorus olitorius cultivar O-4 contig18392, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17612

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--3591
331
10.7
330
86
5
4647
36
14
14
34
1.87
1654--1703
24
2.1
23
88
3
73
46
18
16
20
1.85
5--3591
666
5.4
660
86
5
4721
36
14
14
34
1.87
11666--11690
13
1.9
13
100
0
50
88
0
12
0
0.53
14038--14068
16
1.9
16
100
0
62
25
12
6
54
1.62
15009--15036
13
2.2
13
100
0
56
25
21
0
53
1.46
15336--15434
47
2.1
47
98
0
189
40
12
29
18
1.86
15467--16278
328
2.4
325
84
7
1069
33
13
16
36
1.88

Tables:   1

The End!