Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018362.1 Corchorus olitorius cultivar O-4 contig18395, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  126994

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14130--14166
18
2.1
18
94
0
65
70
0
13
16
1.17
47754--47794
20
2.0
20
100
0
82
41
34
4
19
1.73
51415--51528
46
2.5
46
98
0
219
25
4
7
63
1.39
76915--77044
66
2.0
66
98
0
251
20
17
8
53
1.70
80750--80782
6
5.5
6
100
0
66
30
54
0
15
1.41
81594--81623
5
6.0
5
100
0
60
40
20
0
40
1.52
92501--92546
3
16.7
3
78
17
55
65
2
0
32
1.05
92500--92544
22
2.1
21
87
4
63
64
2
0
33
1.06
92501--92546
19
2.5
19
82
6
60
65
2
0
32
1.05
95487--100643
332
15.6
331
86
4
6542
33
14
15
36
1.87
95487--100643
665
7.8
668
85
4
6679
33
14
15
36
1.87
124725--124764
19
2.1
19
100
0
80
42
20
17
20
1.89
126434--126469
17
2.1
17
90
10
56
52
5
5
36
1.48

Tables:   1

The End!