Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018365.1 Corchorus olitorius cultivar O-4 contig18398, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13098

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6924--6960
1
37.0
1
94
0
65
0
0
2
97
0.18
6914--6960
14
3.5
14
88
5
62
0
0
8
91
0.42
6899--6960
17
3.6
17
83
10
72
0
0
12
87
0.55
6902--6961
24
2.5
24
86
0
75
0
0
13
86
0.57
9804--9942
31
4.5
31
85
6
167
15
23
28
32
1.95
9804--9942
61
2.3
61
84
2
190
15
23
28
32
1.95
10319--11057
333
2.2
332
92
1
1237
33
13
15
36
1.87
11064--13094
333
6.0
333
89
3
3084
37
15
14
32
1.87
11064--13094
683
3.0
667
91
3
3309
37
15
14
32
1.87

Tables:   1

The End!