Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018638.1 Corchorus olitorius cultivar O-4 contig18671, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32800

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79--121
21
2.1
20
91
4
68
27
25
13
32
1.94
3180--3225
21
2.2
21
88
7
67
10
54
15
19
1.70
10580--10619
15
2.5
16
88
8
55
82
0
17
0
0.67
10576--10620
11
4.3
11
86
5
58
82
0
17
0
0.68
11424--12016
36
16.7
36
85
3
704
19
21
18
40
1.92
11424--12016
71
8.4
72
87
3
713
19
21
18
40
1.92
11424--12016
107
5.6
107
87
3
718
19
21
18
40
1.92
11989--12141
45
3.7
42
66
25
101
19
21
19
39
1.93
11969--12144
80
2.2
80
84
4
230
18
23
22
35
1.95
12091--12171
36
2.2
36
89
4
119
16
19
23
40
1.90
12528--13254
30
24.1
30
85
2
895
18
14
19
48
1.81
32592--32643
24
2.3
23
83
6
70
63
3
26
5
1.34
32660--32723
2
32.0
2
100
0
128
50
0
50
0
1.00
32722--32800
3
26.3
3
100
0
158
34
0
32
32
1.58

Tables:   1

The End!