Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018831.1 Corchorus olitorius cultivar O-4 contig18864, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10662

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1178--1247
36
1.9
36
94
0
122
60
7
8
24
1.51
3727--3773
3
15.7
3
95
0
85
0
29
0
70
0.88
4249--4292
23
1.9
23
95
0
79
63
11
4
20
1.44
4829--5872
48
22.0
47
75
7
495
25
3
50
21
1.65
4853--4935
21
3.7
21
70
17
67
16
2
55
25
1.54
4838--5884
96
11.0
96
78
7
620
25
3
49
21
1.65
4838--5905
144
7.5
144
75
6
767
25
3
49
21
1.65
4995--5309
117
2.7
114
81
3
280
24
2
51
22
1.61
5063--5196
69
1.9
69
86
0
187
26
1
50
21
1.57
5219--5258
18
2.2
18
86
0
53
20
0
60
20
1.37
5168--5305
66
2.1
65
86
4
188
21
2
52
23
1.60
5168--5264
33
2.9
34
68
11
92
21
3
53
21
1.59
5234--5905
96
7.0
96
85
1
722
26
3
50
20
1.64
5234--5884
48
13.6
48
80
1
590
25
3
50
20
1.64
9237--9283
21
2.3
20
82
13
60
61
2
29
6
1.32

Tables:   1

The End!