Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019013.1 Corchorus olitorius cultivar O-4 contig19046, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5979

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3597--3677
37
2.1
38
82
8
94
39
11
14
34
1.82
4731--4996
54
5.0
54
80
9
235
26
18
22
33
1.97
4850--5002
50
3.0
50
84
10
193
25
19
24
30
1.98
4730--5002
104
2.6
105
78
6
250
26
18
22
32
1.97
4963--5238
35
7.9
35
86
0
365
26
14
21
37
1.92
4960--5968
70
14.2
70
80
9
834
27
13
19
39
1.90
4970--5968
139
7.1
140
81
7
1052
27
13
20
39
1.90
5252--5968
35
20.6
35
87
3
968
27
13
19
40
1.89

Tables:   1

The End!