Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019129.1 Corchorus olitorius cultivar O-4 contig19162, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16317

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
794--1207
206
2.0
203
91
2
677
44
8
10
36
1.69
1320--1400
39
2.0
40
92
2
137
37
3
8
50
1.51
2118--4363
330
6.9
328
80
7
2267
34
14
14
36
1.87
4366--6648
330
6.9
331
81
6
2511
33
15
14
36
1.88
3641--5062
744
1.9
722
86
5
1974
35
14
14
35
1.87
4436--6648
993
2.2
988
89
2
3372
33
15
14
36
1.88
6419--6869
226
2.0
225
86
5
626
32
16
17
34
1.92
6645--7706
331
3.2
328
81
8
1152
32
14
15
37
1.89
13925--13954
3
10.0
3
92
0
51
0
36
0
63
0.95

Tables:   1

The End!