Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019132.1 Corchorus olitorius cultivar O-4 contig19165, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34332

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2968--3039
35
2.1
35
97
0
135
59
11
20
8
1.57
5301--5349
3
16.0
3
87
4
71
0
32
6
61
1.21
7085--7145
16
4.1
14
76
19
61
27
18
9
44
1.81
7086--7145
30
2.0
29
84
9
77
26
18
10
45
1.81
24336--24361
13
2.0
13
100
0
52
46
15
7
30
1.74
25333--25363
16
1.9
16
93
0
53
0
29
58
12
1.35
26116--26166
25
2.0
26
88
3
77
41
5
11
41
1.66
27355--27397
21
2.0
22
86
4
61
39
0
2
58
1.11
27908--28234
92
3.5
95
80
10
307
40
11
10
37
1.75
28004--28234
92
2.5
90
88
4
356
39
13
9
37
1.77
28210--28265
20
2.8
21
86
8
80
33
10
21
33
1.88
29597--31599
331
6.0
332
86
2
2709
37
16
14
31
1.89
29637--31599
659
3.0
661
88
3
2834
37
16
14
31
1.89
31369--31832
238
2.0
230
81
3
541
37
16
17
29
1.91
31599--34332
669
4.1
670
91
1
4342
36
15
14
33
1.88

Tables:   1

The End!