Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019191.1 Corchorus olitorius cultivar O-4 contig19224, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5784

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18--1406
665
2.1
662
89
3
2087
35
17
15
31
1.91
20--1443
332
4.3
332
87
3
1933
35
17
15
31
1.91
1475--1529
22
2.4
23
96
3
103
47
12
9
30
1.73
1542--2350
333
2.4
331
92
2
1338
36
18
13
31
1.90
5129--5284
77
2.0
77
96
0
285
17
25
32
24
1.97
5262--5309
25
1.9
25
100
0
96
27
8
39
25
1.84

Tables:   1

The End!