Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019199.1 Corchorus olitorius cultivar O-4 contig19232, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12171

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4395--4605
108
2.0
108
82
0
262
45
7
14
31
1.73
4970--6250
335
3.8
331
80
6
1322
33
14
16
36
1.88
6258--12171
332
17.9
329
81
6
5392
33
13
16
36
1.88
8142--8196
23
2.3
24
93
6
103
25
10
18
45
1.82
6929--12170
665
7.9
659
81
6
5400
33
13
16
36
1.88

Tables:   1

The End!