Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019398.1 Corchorus olitorius cultivar O-4 contig19431, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12348

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
306--548
124
2.0
124
90
1
389
24
9
18
47
1.78
2143--4872
330
8.3
330
78
7
2091
37
16
13
32
1.88
2129--4872
664
4.2
659
77
8
2285
37
15
13
33
1.88
4371--5383
511
2.0
509
90
0
1605
35
19
14
30
1.92
4880--6520
334
5.0
327
78
9
1331
35
15
15
33
1.89
11026--11079
28
1.9
28
92
0
90
37
14
9
38
1.79
11615--12327
327
2.2
325
88
3
1038
34
18
15
31
1.92

Tables:   1

The End!