Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019431.1 Corchorus olitorius cultivar O-4 contig19464, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30412

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2692--3949
629
2.0
632
98
0
2416
29
31
14
24
1.94
7178--7224
2
24.5
2
91
8
80
53
0
0
46
1.00
7178--7224
15
3.2
15
96
3
87
53
0
0
46
1.00
7220--7253
16
2.2
16
89
5
52
61
8
2
26
1.40
8016--8160
64
2.3
63
92
1
236
22
4
24
48
1.68
9407--9501
43
2.2
42
83
5
120
49
17
14
17
1.80
9852--10335
128
3.8
127
91
2
754
34
18
21
25
1.96
10350--10553
70
2.9
69
88
4
295
29
18
25
26
1.98
20151--20252
48
2.1
49
90
5
163
48
3
8
39
1.53
21328--21389
26
2.5
25
92
5
99
62
4
19
12
1.47
26016--26140
62
2.0
62
96
0
232
41
8
11
38
1.72
27201--27314
58
2.0
57
89
1
174
31
14
21
32
1.93
28239--28308
36
1.9
36
88
5
106
25
10
8
55
1.61
28822--29233
203
2.0
204
95
1
738
44
8
10
35
1.70

Tables:   1

The End!