Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019678.1 Corchorus olitorius cultivar O-4 contig19711, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12101

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--4447
321
13.7
319
79
6
4377
36
16
14
32
1.89
3--4421
974
4.5
970
86
3
5668
36
16
14
32
1.89
5274--5347
35
2.1
35
90
5
114
24
20
21
33
1.97
10902--11074
83
2.1
83
95
0
310
41
27
8
23
1.82
11029--11182
77
2.0
77
96
0
281
47
24
6
21
1.74

Tables:   1

The End!