Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019863.1 Corchorus olitorius cultivar O-4 contig19896, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1940

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--213
35
6.0
35
80
7
230
25
13
20
41
1.88
20--213
107
1.8
105
87
4
291
25
13
20
40
1.90
1225--1276
26
2.0
26
100
0
104
23
0
26
50
1.50
1683--1930
8
32.1
8
68
18
82
27
11
0
60
1.34
1686--1811
27
5.3
27
66
27
104
30
8
0
60
1.32
1686--1930
4
61.2
4
66
12
74
27
11
0
60
1.34
1686--1922
46
5.2
46
79
11
247
27
11
0
60
1.34
1684--1930
19
13.6
18
70
17
106
27
11
0
60
1.34

Tables:   1

The End!