Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019937.1 Corchorus olitorius cultivar O-4 contig19970, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10970

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1559--1734
37
4.7
37
86
2
208
31
19
17
31
1.94
6939--7111
22
8.1
22
78
6
185
12
24
6
55
1.62
6961--6998
19
2.2
17
86
13
51
10
28
5
55
1.56
6945--7111
43
3.9
43
88
3
205
13
24
7
55
1.63
7122--8090
47
21.1
47
82
8
634
27
19
5
46
1.73
7102--8054
91
10.4
93
82
9
698
27
19
6
46
1.73
7102--8090
138
7.2
140
83
8
1029
27
19
6
46
1.73
7283--7385
54
1.9
54
85
0
143
23
21
7
47
1.76
7353--7425
36
2.0
36
91
0
119
30
17
6
45
1.75
7389--8067
91
7.4
91
88
5
951
29
19
5
45
1.72

Tables:   1

The End!