Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020257.1 Corchorus olitorius cultivar O-4 contig20290, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32694

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
804--1731
198
4.6
197
88
4
1290
34
13
19
32
1.91
804--1728
402
2.3
396
88
5
1367
33
13
19
33
1.91
1740--1770
16
1.9
16
93
0
53
45
6
9
38
1.63
3231--3374
78
1.9
77
83
7
188
38
9
18
34
1.83
5250--5306
25
2.4
24
85
5
71
29
5
3
61
1.35
7334--7406
31
2.4
31
100
0
146
27
0
28
43
1.55

Tables:   1

The End!