Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020405.1 Corchorus olitorius cultivar O-4 contig20438, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16440

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4382--4475
45
2.2
45
87
11
135
40
20
4
35
1.72
5880--6779
331
2.7
332
89
2
1361
35
16
17
31
1.92
6774--16440
640
14.8
645
85
5
10529
34
17
16
31
1.92
9428--16440
333
21.4
333
85
4
8990
34
17
16
31
1.92
13987--16440
664
3.7
661
88
2
3469
34
16
16
31
1.92
11688--16440
997
4.8
988
84
5
5760
34
17
16
31
1.92

Tables:   1

The End!