Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020441.1 Corchorus olitorius cultivar O-4 contig20474, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14658

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3807--3845
6
6.7
6
88
11
55
82
15
0
2
0.79
4705--4745
22
2.0
21
85
9
57
51
14
9
24
1.72
5382--5430
25
2.0
25
88
8
73
12
30
16
40
1.85
5427--5468
21
2.0
20
86
9
57
52
30
0
16
1.44
6267--6315
25
2.0
25
95
0
89
14
32
18
34
1.91
6312--6353
22
2.0
20
86
9
57
47
33
2
16
1.60
7181--7229
25
2.0
25
95
0
89
12
30
20
36
1.89
5185--7528
914
2.6
902
92
3
4008
35
27
10
26
1.89
11631--14655
154
19.6
153
89
2
4218
41
18
18
21
1.91

Tables:   1

The End!