Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020711.1 Corchorus olitorius cultivar O-4 contig20744, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11210

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--52
2
25.5
2
100
0
102
0
49
0
50
1.00
3269--3412
22
6.5
22
71
13
100
38
13
9
37
1.78
3312--3418
44
2.4
45
80
8
123
38
14
9
37
1.79
3396--3472
21
3.8
20
80
10
77
24
19
9
46
1.79
5487--5517
2
16.0
2
93
6
55
51
0
0
48
1.00
5487--5515
15
1.9
15
100
0
58
51
0
0
48
1.00
5483--5518
17
2.2
16
95
5
63
52
0
0
47
1.00
8038--8078
19
2.2
19
86
0
55
60
19
7
12
1.54
9094--9128
5
6.8
5
96
3
61
0
20
0
80
0.72
9081--9128
15
3.0
16
85
14
64
0
22
0
77
0.78
9095--9167
10
8.1
10
79
14
54
0
27
0
72
0.85
9270--9304
18
1.9
18
94
0
61
0
20
0
80
0.72
9278--9329
15
3.3
15
74
15
52
1
23
0
75
0.91
9276--9314
18
2.2
18
86
4
53
2
17
0
79
0.84
9689--11206
334
4.5
333
75
12
1157
36
15
14
33
1.88
10334--11206
348
2.5
338
80
7
874
36
15
14
33
1.87

Tables:   1

The End!