Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020880.1 Corchorus olitorius cultivar O-4 contig20913, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19543

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5632--5664
15
2.2
15
94
0
57
18
18
21
42
1.89
7995--8587
316
1.9
318
81
6
720
37
15
15
31
1.89
8664--10483
320
5.6
318
79
7
1746
36
16
14
33
1.89
15695--17609
323
5.9
319
77
8
1658
36
16
14
32
1.89
15751--17431
652
2.6
643
79
6
1832
36
16
14
32
1.89
17132--18191
582
1.8
582
82
5
1383
37
16
13
32
1.87
18619--19419
320
2.5
320
83
5
931
36
16
13
33
1.88
16696--19542
909
3.1
908
95
1
5131
36
17
14
32
1.90

Tables:   1

The End!