Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020958.1 Corchorus olitorius cultivar O-4 contig20991, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21311

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
417--462
23
2.0
23
95
0
83
50
4
23
21
1.67
7430--8473
99
10.5
99
88
3
1474
27
22
23
26
2.00
7430--8473
200
5.2
201
89
2
1502
27
22
23
26
2.00
7430--8473
299
3.5
298
88
3
1508
27
22
23
26
2.00
12783--12823
2
21.0
2
87
5
57
43
2
0
53
1.13
19107--19521
30
13.7
30
88
3
566
29
22
20
28
1.98
19107--19523
151
2.8
150
88
1
611
29
22
19
28
1.98

Tables:   1

The End!