Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020961.1 Corchorus olitorius cultivar O-4 contig20994, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8543

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
254--863
156
3.9
156
93
0
1058
40
17
18
23
1.90
1517--2102
152
3.8
154
93
1
951
22
17
17
41
1.90
6352--8463
154
13.6
154
89
2
3142
23
17
17
41
1.90
6352--8463
618
3.4
617
90
1
3248
23
17
17
41
1.90
6352--8463
464
4.6
461
89
2
3165
23
17
17
41
1.90

Tables:   1

The End!