Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021021.1 Corchorus olitorius cultivar O-4 contig21054, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12359

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5254--5296
11
3.8
11
84
3
50
81
2
0
16
0.79
7333--7366
17
2.0
17
100
0
68
58
5
11
23
1.55
9422--9456
17
2.1
17
88
0
52
57
0
42
0
0.99
9848--10024
50
3.6
50
88
3
259
45
6
15
33
1.71
10013--10425
51
8.1
51
76
9
220
42
4
14
38
1.66
10072--10425
103
3.5
102
93
1
602
43
4
14
37
1.66
11042--11809
40
19.0
40
87
5
958
15
28
19
37
1.92
11311--11405
49
1.9
49
97
0
181
10
26
23
40
1.87

Tables:   1

The End!