Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01002104.1 Corchorus olitorius cultivar O-4 contig02104, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6311

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
508--3250
332
8.4
329
77
8
2300
34
17
15
32
1.91
806--2622
974
1.9
972
82
4
2334
34
17
15
32
1.91
4034--4061
13
2.2
13
100
0
56
21
7
7
64
1.43
6183--6207
3
8.3
3
100
0
50
68
0
0
32
0.90
6224--6311
3
29.0
3
97
2
167
32
0
1
65
1.00

Tables:   1

The End!