Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021136.1 Corchorus olitorius cultivar O-4 contig21169, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20325

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11--4596
982
4.7
985
79
8
4518
32
14
16
36
1.90
3030--3188
85
1.9
85
88
2
239
30
20
15
33
1.93
4592--6808
335
6.8
327
75
8
1732
32
13
16
36
1.88
7219--7377
85
1.9
85
86
2
230
31
20
14
33
1.93
11104--13827
329
8.2
327
78
7
2548
33
14
16
35
1.89
8234--13907
326
17.3
321
76
9
4368
32
14
16
35
1.90
15585--15679
30
3.0
30
76
16
109
36
15
34
12
1.86
15602--15685
36
2.3
36
87
0
123
36
16
34
11
1.86
19555--19593
2
19.5
2
100
0
78
48
0
0
51
1.00

Tables:   1

The End!