Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021216.1 Corchorus olitorius cultivar O-4 contig21249, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2951

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1208--1606
109
3.7
108
77
5
283
19
21
18
40
1.91
1202--1548
145
2.4
145
81
7
388
19
21
17
40
1.91
1286--1605
71
4.5
70
74
8
200
20
20
18
40
1.92
1202--1636
35
12.3
35
78
4
340
19
21
18
40
1.91
1571--1647
31
2.5
31
95
0
136
16
22
20
40
1.91
1907--2794
30
29.2
30
82
4
1008
21
14
17
46
1.84
1912--2758
273
3.1
273
91
2
1274
21
14
18
46
1.84
2491--2668
97
1.8
97
91
0
293
21
14
20
44
1.86
1907--2758
151
5.6
150
83
6
788
21
14
18
46
1.84

Tables:   1

The End!