Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021493.1 Corchorus olitorius cultivar O-4 contig21526, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38310

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1753--1815
31
2.0
31
96
0
117
44
11
12
31
1.78
9773--9969
100
2.0
100
98
0
385
32
17
22
26
1.97
10737--10790
21
2.6
21
96
0
99
24
40
29
5
1.77
14643--14720
30
2.6
30
97
2
149
43
16
7
32
1.76
21371--21403
8
4.1
8
92
0
57
21
0
39
39
1.53
31920--31952
11
3.1
11
82
8
50
24
6
18
51
1.68
35913--36873
41
23.0
40
79
12
454
35
19
26
18
1.95
35922--36313
80
4.8
80
81
7
423
34
18
27
19
1.95
35913--36315
120
3.3
118
83
4
428
34
18
27
19
1.95
35964--36342
127
3.0
125
80
6
385
34
18
27
18
1.95
36340--36877
41
12.9
41
86
7
681
35
21
25
17
1.95
36489--36597
54
2.0
55
91
3
177
35
19
27
17
1.94
36342--36870
217
2.5
215
85
8
690
35
20
25
17
1.95

Tables:   1

The End!