Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022295.1 Corchorus olitorius cultivar O-4 contig22328, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15089

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
124--172
19
2.6
19
78
15
57
44
0
2
53
1.12
1528--1633
51
2.1
51
81
11
121
22
20
12
44
1.85
6302--6690
195
2.0
195
98
0
751
31
21
16
29
1.96
9033--9351
60
5.4
60
87
5
436
46
6
18
27
1.74
9033--9353
123
2.7
119
86
8
442
46
6
19
27
1.75
9265--9407
32
4.6
32
79
6
159
49
5
18
26
1.69
9028--9602
60
9.4
60
76
13
347
48
6
18
27
1.72
9310--9515
108
1.9
108
87
0
304
48
4
19
27
1.69
9441--9521
32
2.5
32
83
0
99
46
6
17
29
1.72
9499--9542
21
2.1
21
95
0
79
50
4
20
25
1.67
9566--9624
22
2.7
22
94
0
100
54
3
16
25
1.58
9421--9707
78
3.6
75
79
15
240
48
7
16
27
1.72
9601--9733
54
2.4
56
87
2
189
48
9
15
27
1.76

Tables:   1

The End!