Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022434.1 Corchorus olitorius cultivar O-4 contig22467, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18205

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1885--1957
29
2.4
29
81
4
92
28
24
12
34
1.92
2257--2329
29
2.5
31
82
11
98
30
15
27
27
1.96
3001--3239
59
4.0
58
79
6
219
27
6
25
41
1.79
3599--3813
72
3.0
72
94
0
385
32
20
21
26
1.98
5938--5999
31
2.0
31
93
0
106
38
25
20
14
1.91
6495--6519
13
1.9
13
100
0
50
92
0
8
0
0.40
8698--8742
18
2.5
19
85
10
67
0
22
57
20
1.40
8695--8734
15
2.7
15
84
0
53
0
22
57
20
1.41
10725--10765
1
41.0
1
95
0
73
2
0
0
97
0.17
15078--16546
548
2.7
548
96
0
2719
32
14
15
36
1.89
16858--18158
548
2.4
550
96
0
2421
31
15
15
37
1.89

Tables:   1

The End!