Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022451.1 Corchorus olitorius cultivar O-4 contig22484, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10272

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2219--2268
25
2.0
25
96
0
91
24
22
24
30
1.99
2698--2728
13
2.3
14
94
5
55
45
0
0
54
0.99
2738--2811
30
2.4
30
79
2
85
24
27
17
31
1.97
3664--3717
19
2.7
20
82
5
65
51
0
0
48
1.00
4373--4399
5
5.4
5
100
0
54
22
18
0
59
1.38
4670--4714
15
3.0
14
84
12
54
42
0
0
57
0.98
5061--8554
334
10.6
329
76
10
2612
33
14
15
37
1.87
9544--9613
36
1.9
36
94
0
122
21
8
8
61
1.52

Tables:   1

The End!