Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022548.1 Corchorus olitorius cultivar O-4 contig22581, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31866

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2354--2378
13
1.9
13
100
0
50
36
0
16
48
1.46
13119--13143
13
1.9
13
100
0
50
36
0
16
48
1.46
19128--19314
39
4.8
39
92
4
297
34
16
18
30
1.93
19985--20064
41
2.0
40
85
7
108
51
22
8
17
1.73
23783--24246
59
7.9
58
82
5
495
45
4
16
33
1.69
23784--24253
177
2.7
176
86
2
611
45
4
16
32
1.69
24097--24138
19
2.2
20
86
4
59
45
2
16
35
1.61
23784--24246
118
3.9
117
85
5
567
45
4
16
33
1.69
25777--25844
34
2.1
31
83
8
82
58
5
2
32
1.37

Tables:   1

The End!