Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022552.1 Corchorus olitorius cultivar O-4 contig22585, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27482

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
988--1221
42
5.1
48
76
16
214
20
26
16
37
1.93
1003--1221
86
2.5
88
84
7
282
21
26
17
35
1.95
1238--1757
41
12.7
40
79
5
486
14
26
20
38
1.91
1238--1758
82
6.4
82
87
2
647
14
26
20
38
1.91
1317--1838
41
12.7
42
76
5
268
15
26
20
37
1.92
1238--1839
82
7.3
83
86
3
378
14
26
20
38
1.91
1792--1886
50
1.9
50
89
2
147
16
25
22
35
1.95

Tables:   1

The End!