Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022572.1 Corchorus olitorius cultivar O-4 contig22605, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14910

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93--738
47
13.9
47
91
3
977
45
4
18
30
1.70
93--738
234
2.8
233
91
3
1025
45
4
18
30
1.70
4100--4141
11
3.7
11
87
3
57
40
16
2
40
1.62
5981--6025
21
2.1
21
83
0
54
13
17
48
20
1.80
9282--9324
21
2.0
22
90
9
70
79
9
6
4
1.06
10978--11013
18
1.9
19
88
5
56
33
22
5
38
1.77
10996--11025
11
2.7
11
94
0
51
40
20
0
40
1.52

Tables:   1

The End!