Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022751.1 Corchorus olitorius cultivar O-4 contig22784, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18531

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
948--976
9
3.3
9
95
4
51
34
0
20
44
1.52
12070--12551
36
13.5
35
80
11
357
26
17
9
45
1.80
12094--12193
33
3.0
33
86
5
139
32
16
7
45
1.74
12070--12551
72
6.8
71
80
8
450
26
17
9
45
1.80
12224--12532
109
2.9
107
86
5
417
24
16
11
47
1.79
17428--17562
41
3.3
41
76
10
125
46
18
15
19
1.84

Tables:   1

The End!