Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023149.1 Corchorus olitorius cultivar O-4 contig23182, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17802

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2766--2801
19
1.9
18
88
5
54
33
22
2
41
1.68
13292--13340
17
2.9
17
90
0
80
26
8
20
44
1.79
16526--16764
41
6.1
37
71
23
125
32
17
5
44
1.71
16620--16687
33
2.1
33
88
0
100
30
25
4
39
1.75
16563--17244
135
5.1
134
80
8
657
30
17
5
46
1.70
16677--17244
182
3.1
177
85
6
712
30
16
5
47
1.69
16653--17244
47
13.0
47
82
8
695
30
17
5
47
1.70

Tables:   1

The End!