Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023211.1 Corchorus olitorius cultivar O-4 contig23244, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9595

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1155--1232
35
2.2
35
90
0
120
35
14
17
32
1.90
1968--2043
38
2.0
38
84
5
100
51
25
9
14
1.71
2753--2797
20
2.4
19
81
7
56
46
20
8
24
1.78
5013--5065
25
2.1
25
96
0
97
39
16
26
16
1.91
5019--6067
32
32.9
27
74
18
295
37
14
26
21
1.92
5044--6127
129
8.4
131
88
4
1418
37
15
26
21
1.92
5044--6132
228
4.8
225
89
4
1438
37
14
26
21
1.92
5044--6127
357
3.1
354
90
3
1691
37
15
26
21
1.92

Tables:   1

The End!