Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023594.1 Corchorus olitorius cultivar O-4 contig23627, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21164

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
209--267
29
2.1
28
84
6
75
25
5
6
62
1.41
1006--1033
2
14.0
2
100
0
56
50
0
0
50
1.00
1788--1825
12
2.9
13
88
7
51
50
0
2
47
1.15
3469--3771
151
2.0
151
98
0
579
44
20
8
25
1.80
4163--4230
32
2.1
32
97
0
127
8
1
44
45
1.44
5029--5132
52
2.0
52
88
0
154
22
19
7
50
1.72
5035--5182
52
2.9
52
78
5
133
25
19
6
47
1.74
5092--5898
47
18.2
46
78
14
792
28
17
5
48
1.69
5236--5552
36
7.9
36
75
22
276
28
16
4
51
1.64
5188--5870
83
7.9
83
87
7
791
29
16
5
48
1.68
5526--5898
93
4.1
93
88
6
528
30
16
5
47
1.68
5188--5870
180
4.0
172
87
7
770
29
16
5
48
1.68
9331--9399
26
2.6
27
88
2
95
39
27
18
14
1.90
9709--9747
20
2.0
20
90
5
62
33
15
23
28
1.95

Tables:   1

The End!